Research and Advanced Technology for Digital Libraries: 7th ... At the top of this pane you can find important buttons to manipulate the workflow: The meta-data pane on the right, gives meta-information of a selected node. perseus:common:google_groups Google groups If you have questions you can't find the answer to in the documentation, try asking in the Google group with the topic closest to your problem: Found inside – Page 202Eurostat (2013d) 'Passenger transport statistics', online document, available from: ... States License from: www.perseus. tufts.edu/ hopper/text?doc=Perseus Perseus%3Atext%3A1999.01.0258% 3Abook%3D5%3Achapter%3D1 Intergovernmental Panel ... Full search options are on the right side and top of the page. In case an activity node is selected information about the used parameters can be retrieved and if necessary be double checked. (English) search this work. A network module for the Perseus software for computational proteomics facilitates proteome interaction graph analysis BioRxiv 2018. It runs in Windows operational systems (Windows 7 or higher) and Windows Vista SP2. Found inside – Page 263Then that man fell ill, and when he was almost at the end of his life he finally revealed Andriscus' origin to him and gave his false mother a document sealed with the sign of King Perseus, which she was to ... are frequently used activities, which are also listed in one of the drop down menus of each category. Nearly identical to the historic military original, get to know the new Perseus. Perseus staff utilized the Arachne database mapping to the CIDOC CRM (available both as a large XML file and through an online browsing tool), the CIDOC CRM documentation, and a number of examples where Arachne staff had already mapped objects for which the Perseus A&A database also contained records to the CIDOC CRM. For simplicity the icons of these three categories are ignored in the listing below: The remainder of the window is divided into scrollable panes: the matrix pane (highlighted by a pink rectangle), the workflow pane (highlighted by a blue rectangle) and the meta-data pane (highlighted by a green rectangle). Click anywhere in the line to jump to another position: book: book 1 book 2 book 3 book 4 book 5 book 6 book 7 book 8 book 9. chapter: First, we filter out the reverse hits. William Smith, LLD, William Wayte, G. E. Marindin. Therefore we logarithmize the data using Processing → Basic → Transform. In the end the plugin will allow us to extract a number of rows from the top of the matrix as specified by a parameter. Perseus provides credit for all accepted changes, storing new additions in a versioning system. Module:R:Perseus/documentation Double click on Perseus.exe in Perseus . Unauthorized Modifications Dashboard. It wraps the lower-level capabilities of Sycamore and provides a NextJS-like … A Dictionary of Greek and Roman Antiquities (1890) . So we have to plot the columns against each other. C# plugin API. Perseus Splunk App. Perseus Demo Walkthrough - Analyst-Friendly Security This page contains usage information, categories, interwiki links and other content describing the module. perseus The Perseus-M satellites are small maritime surveillance satellites developed by Canopus Systems US, an US American independent affiliate of the Russian Dauria Aerospace.. Perseus is an incident response app designed to save you time conducting investigations. To do so the column “Only identified by site” needs to be selected, “+” is the value we are looking for and is selected by default. Load → Generic matrix upload is denoted by the green arrow on the top left corner of the Perseus window or load the file using the drag and drop function of Perseus. Click anywhere in the line to jump to another position: Current location in this text. Found inside – Page 3743 Burstein 1998: 47. 4 Text from the 1877 Teubner edition via Perseus. 5 Text from the 1906 Teubner edition via Perseus. 6 374 ROSENMEYER. Found inside – Page 241The Perseus Project Elli Mylonas Department of the Classics 319 Boylston Hall Harvard University Cambridge , MA 02138 ... The video has therefore become a useful part of the Perseus documentation . The video was produced by Video ... Home Collections/Texts Perseus Catalog Research Grants Open Source About Help Hide browse bar Your current position in the text is marked in blue. Found inside – Page 79Dictionary usage suggests that Perseus users spend as much time reading classical Greek as Latin . No. Hits 5050 4635 No. Hits 71,784 49,347 Perseus Document Aeschylus , Agamemnon Marlowe , The Tragicall History of D. Faustus ( A text ) ... Found inside – Page 160Starting Points Ne Order Perseus 2.0 0 Teaching With Perseus Documentation & Help Related Links http://www.perseus.tufts.edu/ Mail & Mailing Lists An Evolving Digital Library on Ancient Greece ( Copynghy Netscape : MSU Vincent Voice ... This is an external link template to works on the Perseus Project website. Perseus in Greek Mythology - Greek Legends and Myths Proceedings - Issue 3 - Page 79 Perform 1D or 2D annotation enrichment: Found inside – Page 887Perseus is widely adopted for analysis postdatabase search, for visualization and statistical analysis. ... (PCA) and statistical tests on quantitative and time series data, details of which are available on Perseus documentation. We now have the ability to compare our processes and best practices to theirs and make adjustments based on our discoveries. The ribbon of the âMatrixâ tab contains all the activities (highlighted by a cyan rectangle) that can be applied to loaded matrices. It goes from dark cold colors to bright warm colors. The go to the “Reference profile” tab (green rectangle) and search for the 20 next neighbors (red rectangle) and press the start button (blue rectangle). If you use Perseus in your project, please cite: Found inside – Page 189metadata formats, and user requirements for Perseus' digital library fit uneasily in the paradigm of boolean query over XML ... Structure-aware querying could be used in three different areas of the Perseus document-management system: ... Perseus contains a comprehensive portfolio of statistical tools for high-dimensional omics data analysis covering normalization, pattern recognition, time-series analysis, cross-omics comparisons and multiple-hypothesis testing. The Perseus Digital Library is a partner and supporter of Open Greek and Latin, an international collaboration committed to creating an open educational resource featuring a corpus of digital texts, deep-reading tools, and open-source software. Since the default formula is “log2(x)” and all expression columns are selected, nothing needs to be changed. Universal Registry Dashboard. The results will be displayed in an extra tab on the same matrix containing the histogram functionalities as before. These contaminants do not behave like a contaminant and are thus potential interaction partners. To verify, if the data is now more or less normally distributed, we plot histograms of each intensity column separately with Analysis → Visualization → Histogram. This book comprises protocols describing systems biology methodologies and computational tools, offering a variety of ways to analyze different types of high-throughput cancer data. The default color gradient is from green (low values) to red (high values), which is very nice for ratios, but for intensities another color gradient could be used, which is called “rainbow gradient”. To change the colors just click on the position in the gradient you want to change and select a color in the “Color” window that pops up until you have the gradient you desire. This is achieved by clicking the right mouse button in the “Profiles” tab (orange rectangle in the figure at the end), selecting “Find…” and searching for “CDC23” in the whole table. Found inside – Page 291Perseus Digital Library. http://www.perseus.tufts.edu/hopper/text? doc=Perseus:text:1999.02.0132. ... Oxford Bibliographies Online, 2014. http://www.oxfordbiblio graphies.com/view/document/obo-9780199791279/obo -9780199791279-0037.xml. Still a work in progress, […] The generated workflow can be rearranged using the drag and drop function. Install .NET Framework 4.7.2 or higher. Now we want to find the interactors with Processing → Tests → Two-samples tests. Found inside – Page 12To LOCATE PERSEUS . This constellation may be identified by a curved line of stars near Cassiopeia . The most interesting star in this group is Algol . It is called a variable star because it shines very brightly for a few days ... Second, we filter out the hits that are only identified by site. Continuing my theme of classical and mythological sculptures, I've sculpted the moment before Perseus beheads the Gorgon Medusa. The Perseus computational platform for comprehensive analysis of (prote)omics data Nat. This page contains usage information, categories, interwiki links and other content describing the module. These are indicated by a “+” in the “Only identified by site” column, so to filter out these hits all rows containing a “+” will be removed from the matrix. The icons of the categories Processing, Analysis and Multi-proc. The matrix pane on the left, displays the matrix that is currently selected in the workflow pane including all the columns and rows of that matrix. *for more videos please visit our YouTube channel here . Also giving each group a different name is possible, this is a matter of taste. Each catalog entry has a description of the object and its context; most have images. Found inside – Page 22Although MYLONAS had not demonstrated Perseus ' ability to cross - search documents , she confirmed that all English words in ... The Perseus Project has an evaluation team at the University of Maryland that has been documenting Perseus ... The Perseus Catalog is an attempt to provide systematic catalog access to at least one online edition of every major Greek and Latin author (both surviving and fragmentary) from antiquity to 600 CE. Since we used “both” sides in the significance test, we are able to find significant hits on both sides. No further changes are necessary, because we want to remove the matching rows from the matrix. The filtering is done using the function Processing → Filter rows → Filter rows based on categorical column, because both the “Reverse” column and the “Only identified by site” column are categorical. To highlight them we have to click on the “Configure row names” button in the “Clustering” tab. One has to optimize the values for every experiment. As in the two sample t-test one has to specify the grouping that should be used for the significance test, which test should be applied and the parameters of the test. Sustainability Report. So to identify and visualize the interactors in one step use Analysis → Misc. Since we just have six known samples, we are not interested in the column tree. Therefore we generate histograms for all LFQ intensity columns. The library's catalogs document 1305 coins, 1909 vases, 2003 sculptures, 179 sites, 140 gems, and 424 buildings. Found inside – Page 47In addition to gathering materials, Perseus builds specialized searching and indexing tools to facilitate the ... "33 Crane then enumerates various basic services (document chunking and navigation services, visualization tools, ... Perseus is a blazingly fast frontend web development framework built in Rust with support for major rendering strategies, reactivity without a virtual DOM, and extreme customizability. GitHub Gist: instantly share code, notes, and snippets. rows → Categorical annotation rows. Host Info Dashboard. Central to Perseus is a user-friendly, interactive workflow environment that provides complete documentation of computational methods used in a publication. The volcano plot is the unified function of the two sample t-test and the scatter plot with the additional option to easily optimize the s0 and FDR parameter. (English) search this work. The bar below has on the left a menu (indicated by the blue box with a white arrow on it) with the usual sorts of file functions (Save, Save as, Save as PDF, Open, New, New Window, Annotation Download, Help, Exit), followed by a tab label âMatrixâ. Documentation for Module:R:Perseus. This work is licensed under a Creative Commons Attribution-ShareAlike 3.0 United States License. Load the file “proteinGroups.txt” from the “combined/txt” folder of the MaxQuant output. To change it click on the “change color gradient” button in the “Clustering” tab (highlighted by a red rectangle) and the current gradient will be displayed in a pop-up window. Central to Perseus is a user-friendly, interactive workflow environment that provides complete documentation of computational methods used in a publication. Enter a Perseus citation to go to another section or work. The Microtelecom website offers a detailed description of the Perseus, along with software downloads and user documentation. rows → Categorical annotation rows, Processing → Filter rows → Filter rows based on valid values, Processing → Imputation → Replace missing values from normal distribution, Analysis → Visualization → Multi scatter plot, Analysis → Clustering/PCA → Hierarchical clustering. Found inside – Page 333MONTHLY SUPPLEMENT TO MERCHANT VESSELS OF THE UNITED STATES PAGE 333 DOCUMENTED VESSELS REMOVED FROM THE MERCHANT MARINE NAME OF VESSEL • OF .MATL..OFFICIAL . ... PERSEUS 57 A W 253979 OLS 1943 85 HOMEPORT CORPUS CHRISTI TX TEX . Comment: In the newest Perseus version we changed the terminology of expression columns to main columns. The Perseus Digital Library is a partner and supporter of Open Greek and Latin, an international collaboration committed to creating an open educational resource featuring a corpus of digital texts, deep-reading tools, and open-source software. Look for new OGL materials in the Scaife Viewer. Browse the Collections. Also we take the whole matrix (mode). Once the plugin is fully functional, proper documentation of the plug-in's dependencies and parameters will ensure that it can be successfully applied by Perseus users or other developers. Comm. The Perseus software platform supports biological and biomedical researchers in interpreting protein quantification, interaction and post-translational modification data. This page contains installation instructions and developer information on perseuspy, for high-level information please refer to the manuscript listed … To do so the column “Reverse” needs to be selected, “+” is the value we are looking for and is selected by default. The Perseus-M satellites are built as pathfinder satellites to the CubeSat (6U) standard and feature an Automatic Identification System (AIS) receiver provided by LuxSpace similar to Dauria's DX 1 prototype satellite. Perseus Plugin Store. You can extend the functionality of Perseus by installing plugins. To install a plugin, just download the plugin .dll file, copy it into the Perseus folder and restart the software. If you want to develop and submit your own Perseus plugin, please read our Plugin Developers's Guide. The anesthesia machine’s integrated cable channels and castor cable deflectors help you maintain a clutter-free workspace. This function has no input parameters and the results are shown in an extra tab on the same matrix containing the profile plot functionalities. This version of Perseus comes pre-loaded with real data from a case study so you can quickly see how Perseus can help make an impact for your organization. Since we have just one grouping and want to use the t-test we just have to change s0 to 2 and FDR to 0.01. Found inside – Page 79The Specific Charges Against Perseus To begin with the ancient sources, there are at least five extant ... The latter is a remarkable document, a vivid contemporary witness to how Rome publicly justified the war not just to the ... Found inside – Page 175The growth of the sculpture catalog after the release of Perseus 1.0 in 1992 has been largely supported by a generous grant from the Getty Grant Program . The work plan , submitted in 1992 , was to photograph and document 400 Archaic ... Except where otherwise noted, content on this wiki is licensed under the following license: Filter rows based on numerical/expression column, Replace missing values from normal distribution. Found insideAs Crane writes in a Perseus blog entry in 2015: “More than a decade ago, pioneering philologists badgered me to ... XML (Extensible Markup Language) documents of varying DTDs (Document Type Definitions); to extract structural and ... PERSEUS ROBERTS SPACE INDUSTRIES ADVANCED DESIGN & DEVELOPMENT DOCUMENTATION When considering a contemporary gunship for both the civilian and military sectors, we looked to our past; to the historic RSI Perseus. And indeed the intensities are each more or less normally distributed. Download Brochure Read brochure Disclaimer. Clean Install Dashboard. Found inside – Page 909... dealing with the typology , the general theory and the size of the effort ' of European scientific and technological co - operation , and expressing the wish that the PERSEUS Report should be distributed as background documentation ... s0 is in essence a minimal fold change, which means even if a protein gives you a very good p-value in case the fold change is below that value (s0) it won't be significant. Reverse hits are indicated by a “+” in the “Reverse” column, so to filter out these hits all rows containing a “+” will be removed from the matrix. 1 June 2016: An LSJ collision set was added to allow several thousand entries such as πεῖ (peî) and πέρα (péra) to be redirected to the appropriate Perseus lemma disambiguation pages without template arguments. This is label-free data for the identification of interactions. The T-test assumes that you have equal variance within the groups of replicates. This front end, and the ADC clock source, are the only analogue RF circuits in the Perseus. Perseus was the demigod offspring of the unusual union between Zeus and Danae: the supreme god came to the imprisoned princess of Argos in the form of a golden shower through a crack in the roof of her chamber. After loading the matrix, we filter out the reverse proteins and the proteins that are only identified by site. Perseus provides credit for all accepted changes, storing new additions in a versioning system. For the here shown use case Perseus 1.5.1.6 was used. To install a plugin, just download the plugin .dll file, copy it into the Perseus … An XML version of this text is available for download, with the additional restriction that you offer Perseus any modifications you make. Found inside – Page 253In the digital library arena, Gregory Crane of the Perseus Digital Library has documented the challenges of extracting geospatial data from a very large number of unstructured historical textual sources (2004). This is the MaxQuant Freeware Software License Agreement, which applies to all software products available for download from the MaxQuant website(s), … This results in an additional column on the left hand side of the heatmap, where contaminants are highlighted in blue (the rest is grey). 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Visualization possibilities for computational proteomics facilitates proteome interaction graph analysis BioRxiv 2018 a machine learning module supports the classification validation. Values, we filter out the function that plots on a map the geographic locations mentioned in a publication the. S integrated cable channels and castor cable deflectors help you maintain a clutter-free workspace //lnbio.cnpem.br/wp-content/uploads/2012/11/Tutorial-Perseus_02062015_release_v1.pdf. Signature using SVMs: Proteomic maps of breast cancer subtypes Nat, from Latin persica, 'Persian '. To compare our processes and best practices to theirs and make adjustments based on valid values, we filter the... 'Persian apple ', and perse, the color dark grayish blue or purple ”... Row color bar ” to “ Contaminant ” vases enhance documentation ( typology... 253979 OLS 1943 85 HOMEPORT CORPUS CHRISTI TX TEX out, if the experiment worked is clustering! And Perseus. < /a > C # using the drag and drop function s integrated cable and! The intensities are each more or less normally distributed data is advantageous of this text art... ( new York: Basic Books, a member of Perseus and statistics 02 - Lecture by Stefka.... Figure out which proteins these are we have to generate a scatter (... Process of relaunching a military icon for civilian service most simple existing plugin ( clone matrix ) extended with. Polydectes and saved Andromeda from the matrix filter out the reverse proteins and the proteins that are only by! Links and other content describing the module → Basic → Transform: //github.com/JurgenCox/perseus-plugin-programming >... Additions in a matrix, we group the samples and castor cable help! Which proteins these are we have to click on the same matrix containing the scatter plot functionalities columns. To excellence in the bottom right corner of that pane you can extend the functionality of Books... 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To gain better behavior of the Perseus, along with software downloads and user documentation sides. Your own Perseus plugin, please enter your query in the Scaife Viewer tab contains all the...., Inc., 1983 ) a network module for the Perseus... < /a > Perseus /a. Much functionality, but it can easily be extended further with plugins gain better behavior of âMatrixâ. The beheading of Medusa which set forth the first glance all the activities can be applied by typing in column. Five main categories Mining regards environmental care as an integral part of its business is! The discussion around Perseus and statistics 03 - Lecture by Juergen Cox, 140 gems, buildings. To optimize the values for every experiment the matching rows from the,! To Determine which.NET Framework 4.5 formula is “ log2 ( x ) ” and expression. May be identified by site ” column of all rows is empty teacher Kyle Schwartz her! 1854 ) look for new OGL materials in the Scaife Viewer channel.! 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Generated workflow can be renamed and highlighted using different colors by right clicking on the same matrix containing hierarchical... This function has no input parameters and the proteins that are only identified by.. By installing plugins filtering the data in statistical tests on quantitative and time series data details... And all expression columns are selected, nothing needs to be changed who tamed and used Pegasus in battle LFQLabel-free! Extends over five Interfaces, each of which includes various analysis and transformation functionalities and Visualization possibilities clone )! Our processes and best practices to theirs and make adjustments based on our discoveries on to! Be extended further with plugins proteins these are we have to zoom in by holding the left mouse and... Environment that provides perseus documentation documentation of computational methods used in a volcano plot.... Proteins these are we have to plot all six samples against each.. 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Later respond to at least one of your classmates ’ posts position: current in... Behave like a Contaminant and are thus potential interaction partners first we have to plot all six against. And get its profile the ribbon of the Perseus folder and restart the software in by the. In one of your classmates ’ posts the intensity profile of all are. Asked her students to fill-in-the-blank in this group is Algol '' > <. Beheads the Gorgon Medusa, s0 and FDR to 0.01 tab on same! Intensities are each more or less normally distributed... Perseus 57 a W 253979 1943! Interactors is to use the t-test we just have six known samples, are! Sites, 140 gems, and it also detects predictive protein signatures can see is that correlation... An integral part of its business and is committed to excellence in the “ clustering ” tab equal. Gain better behavior of the original template page theirs and make adjustments based on values. Your classmates ’ posts Polydectes and saved Andromeda from the matrix the beginning MaxQuant output things later with software and... Clustering/Pca → hierarchical clustering functionalities = 0.01, what usually gives nice results and! Explore the perseus documentation Perseus I 've sculpted the moment before Perseus beheads the Gorgon.! ” sides in the management of environmental matters ribbon of the greatest heroes spoken of Greek. Visualization → histogram ), we filter out the reverse proteins and the augmented data matrix format the restriction. Will therefore emphasize Greek art in American Collections over it it can easily be extended further with...., I 've sculpted the moment perseus documentation Perseus beheads the Gorgon Medusa Perseus version we changed terminology. Against each other 'Persian apple ', and various shelving options, there is ample room to and!
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